FASTA Index File

Type: object

An index file for biological sequences in FASTA or FASTQ format. This is typically produced by samtools faidx.

 No Additional Properties

root $schema
Type: string

The schema to use.

root fa_index_file
Type: object

root fa_index_file other_data
Type: object

Location of additional metadata for this file, typically stored as a list (via the simple_list schema). Ommitted if no other metadata is provided.

root fa_index_file other_data resource
Type: object

root fa_index_file other_data resource path
Type: string

Relative path of the resource from the root of the project directory.

root fa_index_file other_data resource type
Type: enum (of string)

Type of file. Local files should be present in the same project directory.

Must be one of:

  • "local"

root is_child
Type: boolean Default: false

Is this a child document, only to be interpreted in the context of the parent document from which it is linked? This may have implications for search and metadata requirements.

root md5sum
Type: string

MD5 checksum for the file.

root path
Type: string

Path to the file in the project directory.