GMT file

Type: object

A file in the gene matrix transposed (GMT) format, containing feature set information. Each line corresponds to one feature set and is tab delimited. The first column contains the name of the set, the second column contains a description for the set, and the remaining columns contain the identifiers for the features in that set.

 No Additional Properties

root $schema
Type: string

The schema to use.

root gmt_file
Type: object
No Additional Properties

root gmt_file compression
Type: enum (of string)

The compression format.

Must be one of:

  • "none"
  • "gzip"
  • "bzip2"
  • "bgzip"

root gmt_file other_data
Type: object

Location of additional metadata for this file, typically stored as a list (via the simple_list schema). Ommitted if no other metadata is provided.

root gmt_file other_data resource
Type: object

root gmt_file other_data resource path
Type: string

Relative path of the resource from the root of the project directory.

root gmt_file other_data resource type
Type: enum (of string)

Type of file. Local files should be present in the same project directory.

Must be one of:

  • "local"

root is_child
Type: boolean Default: false

Is this a child document, only to be interpreted in the context of the parent document from which it is linked? This may have implications for search and metadata requirements.

root md5sum
Type: string

MD5 checksum for the file.

root path
Type: string

Path to the file in the project directory.