vcf_experiment.hpp File Reference

Validation for VCF-based experiments. More...

#include <string>
#include <stdexcept>
#include <filesystem>
#include "ritsuko/hdf5/hdf5.hpp"
#include "utils_public.hpp"
#include "utils_string.hpp"
#include "utils_summarized_experiment.hpp"
#include "utils_json.hpp"
#include "utils_files.hpp"

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Namespaces
namespace	takane
	takane validation functions.
namespace	takane::vcf_experiment
	Definitions for VCF experiments.

Functions
void	takane::vcf_experiment::validate (const std::filesystem::path &path, const ObjectMetadata &metadata, Options &options)
size_t	takane::vcf_experiment::height (const std::filesystem::path &path, const ObjectMetadata &metadata, Options &options)
std::vector< size_t >	takane::vcf_experiment::dimensions (const std::filesystem::path &path, const ObjectMetadata &metadata, Options &options)

Detailed Description

Validation for VCF-based experiments.