takane::fastq_file Namespace Reference

Definitions for FASTQ files. More...

Functions
void	validate (const std::filesystem::path &path, const ObjectMetadata &metadata, Options &options)

Detailed Description

Definitions for FASTQ files.

Function Documentation

validate()

void takane::fastq_file::validate ( const std::filesystem::path & path, const ObjectMetadata & metadata, Options & options )

inline

If Options::fastq_file_strict_check is provided, this enables stricter checking of the FASTQ file contents and indices. By default, we just look at the first few bytes to verify the files.

Parameters

path	Path to the directory containing the FASTQ file.
metadata	Metadata for the object, typically read from its OBJECT file.
options	Validation options.